.. DO NOT EDIT.
.. THIS FILE WAS AUTOMATICALLY GENERATED BY SPHINX-GALLERY.
.. TO MAKE CHANGES, EDIT THE SOURCE PYTHON FILE:
.. "examples_gallery/mkh5mne/no_events.py"
.. LINE NUMBERS ARE GIVEN BELOW.

.. only:: html

    .. note::
        :class: sphx-glr-download-link-note

        Click :ref:`here <sphx_glr_download_examples_gallery_mkh5mne_no_events.py>`
        to download the full example code

.. rst-class:: sphx-glr-example-title

.. _sphx_glr_examples_gallery_mkh5mne_no_events.py:


EEG without events or epochs
############################

.. GENERATED FROM PYTHON SOURCE LINES 5-11

.. code-block:: default

    import mne
    from mkpy.io import mkh5mne

    print(mne.__version__)
    mne.viz.set_browser_backend("matplotlib")  # for docs generation





.. rst-class:: sphx-glr-script-out

 Out:

 .. code-block:: none

    1.0.3
    Using matplotlib as 2D backend.




.. GENERATED FROM PYTHON SOURCE LINES 12-14

This example is a resting EEG recording with no mkpy codemapped
events or epochs tables.

.. GENERATED FROM PYTHON SOURCE LINES 15-21

.. code-block:: default

    eeg_h5_f = "../mkh5_data/sub000eeg.h5"
    mne_raw = mkh5mne.from_mkh5(
        eeg_h5_f,
        dblock_paths=["open/dblock_0", "closed/dblock_0"],
    )





.. rst-class:: sphx-glr-script-out

 Out:

 .. code-block:: none

    ok
    checking info, montage closed/dblock_0
    Creating RawArray with float64 data, n_channels=39, n_times=45568
        Range : 0 ... 45567 =      0.000 ...   182.268 secs
    Ready.
    /usr/share/miniconda/envs/env_3.8/lib/python3.8/site-packages/mkpy/io/mkh5mne.py:1478: RuntimeWarning: Not setting positions of 5 eog channels found in montage:
    ['lle', 'lhz', 'HEOG', 'rle', 'rhz']
    Consider setting the channel types to be of EEG/sEEG/ECoG/DBS/fNIRS using inst.set_channel_types before calling inst.set_montage, or omit these channels when creating your montage.
      raw_dblock.set_montage(montage)
    Creating RawArray with float64 data, n_channels=39, n_times=45568
        Range : 0 ... 45567 =      0.000 ...   182.268 secs
    Ready.
    /usr/share/miniconda/envs/env_3.8/lib/python3.8/site-packages/mkpy/io/mkh5mne.py:1478: RuntimeWarning: Not setting positions of 5 eog channels found in montage:
    ['lle', 'lhz', 'HEOG', 'rle', 'rhz']
    Consider setting the channel types to be of EEG/sEEG/ECoG/DBS/fNIRS using inst.set_channel_types before calling inst.set_montage, or omit these channels when creating your montage.
      raw_dblock.set_montage(montage)
    EEG data marked as already having the desired reference.




.. GENERATED FROM PYTHON SOURCE LINES 22-27

.. code-block:: default

    mne_raw.plot(
        scalings={"eeg": 5e-5, "eog": 1e-4},
        start=282.0,
        n_channels=39,
    )



.. image-sg:: /examples_gallery/mkh5mne/images/sphx_glr_no_events_001.png
   :alt: no events
   :srcset: /examples_gallery/mkh5mne/images/sphx_glr_no_events_001.png
   :class: sphx-glr-single-img


.. rst-class:: sphx-glr-script-out

 Out:

 .. code-block:: none

    Opening raw-browser...

    <MNEBrowseFigure size 800x800 with 4 Axes>




.. rst-class:: sphx-glr-timing

   **Total running time of the script:** ( 0 minutes  2.563 seconds)


.. _sphx_glr_download_examples_gallery_mkh5mne_no_events.py:


.. only :: html

 .. container:: sphx-glr-footer
    :class: sphx-glr-footer-example



  .. container:: sphx-glr-download sphx-glr-download-python

     :download:`Download Python source code: no_events.py <no_events.py>`



  .. container:: sphx-glr-download sphx-glr-download-jupyter

     :download:`Download Jupyter notebook: no_events.ipynb <no_events.ipynb>`


.. only:: html

 .. rst-class:: sphx-glr-signature

    `Gallery generated by Sphinx-Gallery <https://sphinx-gallery.github.io>`_